Corticiaceae

Corticiaceae Herter, Krypt.-Fl, Brandenburg (Leipzig) 6(1):70 (1910)

Background

Corticiaceae is one of the oldest family names established by Heter (1910) and for a long time was a repository for all basidiomycetes sharing corticioid type of fruiting body, that is basidiomes with resupinate or cortex-like appearance formed over the surface of the substrata. In this traditional sense, Corticiaceae included many distantly related taxa, now shown to be distributed in different orders of basidiomycete phylogeny (Binder et al. 2005). The family name was conserved against Vuilleminiaceae by Pouzar (1985). Corticiaceae taxa are widespread and inhabit a wide range of substrata. Corticiaceae present diverse nutritional habits, with saprotrophic, plant pathogenic, mycoparasitic, lichenized and lichenicolous members. Species of Limonomyces and Waitea are plant pathogens, whereas Erythricium and Laetisaria also include saprotrophic, mycoparasitic, or lichenicolous species. Several species in this family form visible pink fruiting bodies on living or dead plants. The phytopathogenic species are mostly the agent of ‘pink disease’ in turfgrasses or woody perennials. Several taxa in this family are known only as asexual morphs, while plant pathogenic genera are sexual morph-typified and form sexual fruiting bodies, in addition to their asexual state.

ClassificationAgaricomycetes, incertae sedis, Corticiales

TypeCorticium Pers., Neues Mag. Bot. 1:110 (1794)

Distribution – Worldwide

Disease Symptoms – Brown ring patch, Pink disease, Pink Patch disease, Red thread Sheath spot.

The symptoms include the production of salmon pink mycelium on branches and stems of trees resulting in twig and branch injuries, stem canker and eventually death of the host (Sebastianes et al. 2007). With sheath spot disease, lesions first appear as water-soaked areas with grey-green to straw coloured centers and a brown margin. Leaves of infected sheaths usually turn yellow and die (Lanoiselet et al. 2007). Circular or irregular small patches of tan to yellow-brown are the initial symptoms of brown ring patch disease. The affected grasses eventually develop brownish rings (Toda et al. 2005). In pink patch and red thread disease, small water-soaked spots covering a larger portion of the grass leaf can be observed. The tissue dries out and fades to a tan colour and is covered with pink mycelium.

HostsCitrus sp., Coffea sp., Hevea sp., Poaceae

Morphological based identification and diversity

The 10th edition of Dictionary of Fungi (Kirk et al. 2008), enumerates 29 genera and 136 species associated with Corticiaceae. This figure is, however, outdated as many taxa recorded there do not belong to Corticiaceae, following the most recent phylogenies. The family was delimited in its strict sense by Ghobad-Nejhad et al. (2010). They found that Corticiaceae forms a small, well-supported clade in Corticiales containing several polyphyletic genera in need of revision, and confirmed that it is the most diverse family in Corticiales with regard to its high ecological and nutritional diversity (Lawrey et al. 2008). Corticiaceae currently encompasses about ten genera and about 40 species. A taxonomic and phylogenetic revision of the family is underway (Ghobad-Nejhad et al., unpublished), which is out of the scope of this study. The four genera with plant pathogenic taxa viz., Laetisaria, Limonomyces, Eryhtricium, and Waitea are discussed in the following parts. Tretopileus is briefly noted here.

Tretopileus is a small asexual genus established by Dodge (1946) for a curious fungus found on cactus. The genus is typified by T. opuntiae, and two more species, T. indicus and T. sphaerophorus, were subsequently added to the genus. Okada et al. (1998) showed that T. sphaerophorus was placed in “Aphyllophorales“, But later studies confirmed its position in Corticiales (Rungjindamai et al. 2008), and within Corticiaceae (Ghobad-Nejhad et al. 2010). To date, only T. sphaerophorus has been subject to phylogenetic studies, while the affinities of the generic type as well as T. indicus are yet to be examined. Okada et al. (1998) believe that Tretopileus species may be weakly parasitic on plants.

Most Corticiaceae species form visible pink fruiting bodies on living or dead plants. Basidia are usually large with a swollen base, producing large ellipsoid basidiospores. However, as stated above, the boundaries between genera are perplexing due to overlapping characters.

Molecular based identification and diversity

During efforts to unravel Agaricomycetes phylogeny, the lineages belonging to Corticiaceae have been restricted to a small clade more commonly named as ‘corticioid clade’. This clade was formally established as Corticiales by Hibbett et al. (2007). Corticiales was subsequently shown to encompass three well-supported clades recognized by Ghobad-Nejhad et al. (2010) under three family names Corticiaceae, Punctulariaceae and Vuilleminiaceae. Circumscription of most of the genera in Corticiaceae is problematic and synapomorphies for generic and specific delimitations in Corticiaceae are not yet resolved. The phylogenetic tree provided (Fig) is based on a combined dataset of ITS, nSSU, nLSU, and mtSSU sequence data. This phylogenetic tree is largely in accordance with earlier studies and provides the most conclusive phylogeny of the family to date.

Recommended genetic markers (genus level) – LSU, mtSSU

Recommended genetic marker (species level) – ITS

 

Accepted genera: In this family, ten genera have been accepted, all with DNA molecular data.

References: Binder et al. 2005, Hibbett et al. 2007, Ghobad-Nejhad et al. 2010 (morphology and phylogeny). Toda et al. 2005, Sebastianes et al. 2007 (molecular phylogeny and pathogenicity)

Table  Corticiaceae. Details of the isolates used in the phylogenetic analyses. Ex-type (ex-epitype) strains are in bold and marked with an * and voucher strains are in bold.

Species Isolate ITS nLSU nSSU mtSSU
Corticium roseum MG43 GU590877 EF537893 a
Cytidia salicina mg49 GU590881 HM046921 AF214458a
Erythricium atropatanum MG58* GU590876 GU590880
E. laetum MG72 GU590875 GU590878
E. laetum MG73 GU590874 GU590879
E. salmonicolor BNR-KT-06 EU435008 AY672680a
E. salmonicolor BNR-BRVT-05 EU435009 AY672678a
E. salmonicolor Royal Delicious KF029722 KF029722
Galzinia incrustans HHB-12952-sp AF518617 AF518578 AF518679
Giulia tenuis BCC13066 EF589739 EF589732
Laetisaria arvalis CBS 131.82* EU622841 a EU622842 EU622843 HQ168390
L. fuciformis NJ-2 Jackson EU118639 AY293192 AY293139 AY293232
L. lichenicola CBS 128705* NR_121484 HQ168400 HQ168399 HQ168389
Limonomyces culmigenus ATCC 22523 EU622849 EU622848 EU622847
L. roseipellis CBS 299.82 EU622846 EU622844 EU622845 HQ168396
L. roseipellis T-13-1 KC193592 KF824726a AY613915a KF824721a
Marchandiomyces aurantiacus CBS 718.97 AY583324 AY583330 DQ915460a
M. aurantiacus CBS 128706 HQ168397 HQ168397 HQ168398 HQ168388
Marchandiomyces buckii ATCC MYA 2992 (JL244-03)* DQ915472 DQ915462 HQ168392
M. corallinus ATCC MYA 3182 AY583327a AY583331 a DQ915464 HQ168393
M. lignicola ATCC MYA 3674 FJ172272 a AY583332 a DQ915465 HQ168391
M. marsonii ATCC MYA 4210* EU622840 EU622839 EU622838 HQ168395
M. nothofagicola JL-261-04 DQ915474 DQ915474 DQ915466 HQ168394
M. quercinus FCUG1166 KP864659b HM046929a
Marchandiomphalina foliacea Palice 4369 AY542865 AY542865 AY542865
M. foliacea Palice 2509 AY542864 AY542864 AY542864
Tretopileus sphaerophorus JCM10092 AB006005
Vuilleminia comedens T-583 HM046880a AF518666 AF518594 AF518699
Waitea circinata AFTOL-ID 1129 DQ356414a AY885164 FJ440234 a
W. circinata SK-OA-W3-I HM597147 AD001658 a FJ440232 a
W. circinata X-54 KC176341 KC176341 FJ440221a

a Sequences obtained from a different isolate

b Newly generated sequence

Fig. Phylogram generated from bayesian analysis based on combined ITS, nSSU, nLSU, and mtSSU sequence data of Corticiaceae. Bayesian posterior probabilities are indicated above the nodes. The sequences were obtained from GenBank. Thirty one isolates were included in the analyses, comprising 3797 characters including gaps. The tree obtained from Bayesian analyses with the average standard deviation of split frequency equal to 0.005882 is presented. Among these, 2585 characters were constant, and 550 characters were variable but parsimony uninformative. The analyses run for 30 million generations and 8 MCMCMC chains, with 5000 sample frequency. The ITS partition was analysed with GTR+G model of nucleotide evolution, while the nSSU, nLSU, and mtSSU datasets were analysed using GTR+I+G model, as suggested by MrModeltest. The ex-type (ex-epitype) and voucher strains are in bold. The scale bar indicates 0.03 changes. The tree is rooted with Cytidia salicina.

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